commands.abinit_homo

Homogeneous neural net ab initio reconstruction with hierarchical pose optimization.

Example usage

$ cryodrgn abinit_homo particles.256.txt –ctf ctf.pkl –ind chosen-particles.pkl -o cryodrn-out/256_abinit-homo

Functions

add_args(parser)
get_latest(args)
main(args)
make_model(args, D)
pretrain(model, lattice, optim, batch[, tilt])
save_checkpoint(model, lattice, pose, optim, ...)
save_config(args, dataset, lattice, out_config)
sort_base_poses(pose)
sort_poses(pose)
train(model, lattice, ps, optim, batch[, ...])